The main goal of the Opening Reproducible Research (ORR) project was the design, implementation, and evaluation of the Executable Research Compendium (ERC). The ERC encapsulates a scientific paper with the used data and software to enable third parties to reproduce the original research results (figures, tables). It also facilitates interaction with these results and the recombination of ERCs with other data. Although reviewed as a high-risk experiment for providing reproducibility, the objectives of ORR have been completed. ORR’s results did not only lead to visibility in the scientific community, but also to a large interest by external partners from the publishing sector to introduce ERCs in concrete cooperations. This follow-up project proposal, O2R2, builds on the results from the ORR project, particularly the pro- totypes and specifications as well as the insights gained regarding the needs and practices of scientists. O2R2 contributes to changing the way scientific results are communicated and disseminated by realising a broad-based deployment of ORR’s concepts and solutions in pilot applications, by engaging various stake- holders, and by creating user incentives. Hence, O2R2 opens access by transforming (i) technology, (ii) organisations and workflows, and (iii) individual behaviour. O2R2 will transform technology of scientific publishing by enhancing publications in three pilot applica- tions. Two pilots realise special journal issues with publishers, where ERCs are provided as supplementary assets enhancing review and reading workflows. The third pilot implements the ERC as the object of scien- tific publication and integrates it with the Open Journal Systems (OJS) publishing software. Organisations and workflows will be transformed by explicitly tackling barriers for adoption of ERCs by potential infras- tructures operators, and by broadening the scope of ORR towards geospatial analyses with large data. Transforming individual behaviour will be pursued by developing tools to assist scientists in interacting with ERCs. In ORR, we conducted a series of studies to identify problems and needs of open reproducible re- search. Immediate benefits for preparing code and data are lacking, and even if underlying materials are accessible, research results are not necessarily reproducible as we found while reproducing geoscientific papers. Scientists need easy-to-use tools to create executable papers, e.g. by only submitting their project folder. In O2R2, we address these issues by lowering barriers for the creation of ERCs, and create tangible incentives for researchers to publish ERCs. Throughout the entire project, key figures are collected to gather long-term operational requirements of the new publication workflow. Combined with user studies, this data allows profound evaluation of ERC’s potential. O2R2 puts the ERC from laboratory conditions out into the real world of scientific practice and sustainably contributes to the open access transformation.
| Kray, Christian | |
| Pebesma, Edzer | |
| Tröger, Beate |
| Kray, Christian | |
| Pebesma, Edzer | |
| Tröger, Beate |
| Konkol, Markus | |
| Nüst, Daniel |
Duration: 01/11/2015 - 31/12/2018 | 1st Funding period Funded by: DFG - Scientific Library Services and Information Systems Type of project: Individual project |
Granell C, Hofer B, Nüst D, Ostermann FO, Sileryte R (2020) In: ((Bitte Journal prüfen)), 2020(100), 155-172. doi:10.35424/rcarto.v0i100.668 Research article (journal) | Peer reviewed | Published | |
Bigga Alexander, Brändle Martin, Bölter Ronny, Decker Constanze, España Maria, Eilbacher Gerhard, Flasko Matthias, Krabbes Frank, Leugers-Scherzberg August H., Mühlhölzer Marianna, Müller Dennis, Münch Philip, Niers Tom, Nüst Daniel, Pachzelt Adrian, Plich Maximilian, Steffen Ronald, Thoden Klaus, Varachkina Hanna, Warner Paul, Weiher Nils, Wolf Daniela, Withanage Dulip (2020) Other scientific publication | Published | |
Kray C, Pebesma E, Konkol M, Nüst D (2019) In: Timpf S, Schlieder C, Kattenbeck M, Ludwig B, Stewart K (eds.), 14th International Conference on Spatial Information Theory (COSIT 2019). Dagstuhl, Germany: Dagstuhl Publishing. doi:10.4230/LIPIcs.COSIT.2019.8 Research article in edited proceedings (conference) | Peer reviewed | Published | |
Nüst D, Eddelbuettel D, Bennett D, Cannoodt R, Clark D, Daroczi G, Edmondson M, Fay C, Hughes E, Lopp S, Marwick B, Nolis H, Nolis J, Ooi H, Ram K, Ross N, Shepherd L, Turaga N, Willis C, Xiao N, Petegem CV (2020) Other scientific publication | Published | |
Konkol M, Nüst D, Goulier L (2020) Other scientific publication | Published |
| Publishing Reproducible Geoscientific Papers: Status quo, benefits, and opportunities
Candidate: Konkol, Markus | Supervisors: Kray, Christian Period of time: 01/03/2016 - 18/10/2019 Doctoral examination procedure finished at: Doctoral examination procedure at University of Münster | |
| Infrastructures and Practices for Reproducible Research in Geography, Geosciences, and GIScience Candidate: Nüst, Daniel | Supervisors: Pebesma, Edzer Period of time: 04/01/2016 - 14/02/2022 Doctoral examination procedure finished at: Doctoral examination procedure at University of Münster |
| GIScience 2021 Award for Best Paper Awarded by: GIScience Organising Committee Award given to: Ostermann, Frank; Nüst, Daniel; Granell, Carlos; Hofer, Barbara; Konkol, Markus Announced at: 30/09/2021 | Date of awarding: 01/01/2021 Type of distinction: Best publication award |
| Code Execution and Code Review in the Scholarly Communication Process Nüst, Daniel (28/07/2021) Mannheim Open Science Meetup, Online Type of talk: practical Talk | |
| Executing workflows during peer review for transparency, reproducibility, and reusability Nüst, Daniel (23/06/2021) Thüringer FDM-Tage 2021 "Datendokumentation: A love note to the future!", Thüringen, Deutschland Type of talk: scientific Talk | |
| Practical reproducibility and reproducibility vs. peer review Nüst, Daniel (20/05/2021) Spatial Data Science Hangout, Center for Spatial Studies, UCSB (online) Type of talk: scientific Talk | |
| Reproducible graduate theses in GIScience Granell, Carlos; Sileryte, Rusne; Nüst, Daniel (02/12/2020) Research Reproducibility 2020, Online Type of talk: scientific Talk | |
| Reproducibility and Peer Review Nüst, Daniel (01/12/2020) Virtual kick off meeting of the Open Reproducible Data Science and Statistics (ORDS) network, University of Rostock, Rostock, Germany Type of talk: practical Talk |