Institute of Experimental Pathology

Status: Organisation is active

Website: https://www.medizin.uni-muenster.de/zmbe/die-institute-des-zmbe/inst-fuer-experimentelle-pathologie.html

Address:

Von-Esmarch-Straße 56

48149 Münster

Germany

Publications

msiFlow: automated workflows for reproducible and scalable multimodal mass spectrometry imaging and microscopy data analysis. Spangenberg P; Bessler S; Widera L; Bottek J; Richter M; Thiebes S; Siemes D; Krauß SD; Migas LG; Kasarla SS; Phapale P; Kleesiek J; Führer D; Moeller LC; Heuer H; Van de Plas R; Gunzer M; Soehnlein O; Soltwisch J; Shevchuk O; Dreisewerd K; Engel DR (2025) In: Nature Communications, 16(1), 1065-1065. doi:10.1038/s41467-024-55306-7 Research article (journal) \| Peer reviewed \| Published
Spatial biology using single-cell mass spectrometry imaging and integrated microscopy Potthoff A.; Schwenzfeier J.; Niehaus M.; Bessler S.; Hoffmann E.; Soehnlein O.; Höhndorf J.; Dreisewerd K.; Soltwisch J. (2025) In: Nature Communications, 16(1), 9129-9129. doi:10.1038/s41467-025-64603-8 Research article (journal) \| Peer reviewed \| Published
A 4-lineage Statistical Suite to Evaluate the Support of Large-Scale Retrotransposon Insertion Data to Reconstruct Evolutionary Trees Churakov, Gennady; Kuritzin, Andrej; Chukharev, Konstantin; Zhang, Fengjun; Wünnemann, Florian; Ulyantsev, Vladimir; Schmitz, Jürgen (2023) In: Systematic Biology, 72(3), 649-661. doi:10.1093/sysbio/syac082 Research article (journal) \| Peer reviewed \| Published
Homoplasy of Retrotransposon Insertions in Toothed Whales Doronina, Liliya; Ogoniak, Lynn; Schmitz, Jürgen (2023) In: Genes, 14(1830). doi:10.3390/genes14091830 Research article (journal) \| Peer reviewed \| Published
paPAML: An Improved Computational Tool to Explore Selection Pressure on Protein-Coding Sequences Steffen, R.; Ogoniak, L.; Grundmann, N.; Pawluchin, A.; Soehnlein, O.; Schmitz, J (2022) In: Genes, 2022. doi:10.3390/genes13061090 Research article (journal) \| Peer reviewed \| Published

Show all publications (116)

Projects

KFO 342 - P1: Targeting nociceptors to modulate neutrophil mobilization and homing in sepsis Duration: 01/10/2023 - 30/09/2026 \| 2nd Funding period Funded by: DFG - Clinical Research Unit Type of project: Subproject in DFG-joint project hosted at University of Münster
CRC TRR 332: Neutrophils - origin, fate & function (SFB TRR 332) Duration: 01/07/2022 - 30/06/2026 \| 1st Funding period Funded by: DFG - Collaborative Research Centre Type of project: Main DFG-project hosted at University of Münster
CRC TRR 332 - Z01: Visualizing neutrophils in context Duration: 01/07/2022 - 30/06/2026 \| 1st Funding period Funded by: DFG - Collaborative Research Centre Type of project: Subproject in DFG-joint project hosted at University of Münster
CRC 1009 - A13: Neutrophils regulate endothelial dysfunction in atherosclerosis Duration: 01/06/2021 - 30/06/2024 \| 1st Funding period Funded by: DFG - Collaborative Research Centre Type of project: Subproject in DFG-joint project hosted at University of Münster
RTG 2220: Evolutionary Processes in Adaptation and Disease (RTG 2220 EvoPAD) Duration: 01/04/2017 - 30/09/2023 \| 1st Funding period Funded by: DFG - Research Training Group Type of project: Main DFG-project hosted at University of Münster

Show all projects (16)

Preisverleihungen

Bernhard Rensch-Preis Awarded by: Gesellschaft für Biologische Systematik (GfBS) Award given to: Suh, Alexander Date of awarding: 15/04/2013 Type of distinction: Research award or other distinction
Leuchtturmprojekt 2006 Awarded by: Gesellschaft zur Förderung der Westfälischen Wilhelms-Universität zu Münster e.V. Award given to: Schmitz, Jürgen Date of awarding: 01/01/2006 Type of distinction: Research award or other distinction

Promotionen

Identification of bacterial traits involved in interference with horizontal gene transfer in Escherichia coli 2025 Candidate: Yilmaz Terzioglu, Yeliz \| Supervisors: Dobrindt, Ulrilch; Kurtz, Joachim, Schmitz, Jürgen \| Reviewers: Dobrindt, Ulrilch; Kurtz, Joachim, Schmitz, Jürgen Period of time: 01/10/2020 - 09/05/2025 Doctoral examination procedure finished at: Doctoral examination procedure at University of Münster
Contribution of non-coding RNAs to the pathogenesis of cardiovascular diseases Candidate: Ghalawinji, Amer (MHD) \| Supervisors: Stoll, Monika; Bornberg-Bauer, Erich; Schmitz, Jürgen \| Reviewers: Stoll, Monika; Bornberg-Bauer, Erich; Schmitz, Jürgen Period of time: 01/04/2020 - 09/04/2024 Doctoral examination procedure finished at: Doctoral examination procedure at University of Münster
IncRNAs as a novel epigenetic layer in the genetic predisposition to heart failure Candidate: Gandhi, Shrey \| Supervisors: Stoll, Monika; Bornberg-Bauer, Erich; Schmitz, Jürgen Period of time: 16/08/2017 - 30/09/2020 Doctoral examination procedure finished at: Doctoral examination procedure at University of Münster
The genomic stability of the pathogenicity islands of uropathogenic Escherichia coli 536: the role of extrinsic and intrinsic factors Candidate: Chitto, Marco \| Supervisors: Dobrindt, Ulrich; Kurtz, Joachim; Schmitz, Jürgen Period of time: 01/02/2016 - 16/09/2020 Doctoral examination procedure finished at: Doctoral examination procedure at University of Münster
The power of ancient retroposed sequences to resolve problematic mammalian evolutionary questions Candidate: Doronina, Liliya \| Supervisors: Schmitz, Jürgen Period of time: 01/02/2013 - 27/01/2017 Doctoral examination procedure finished at: Doctoral examination procedure at University of Münster

Show all doctorates (20)

Habilitationen

Echoes from the Past: What Ancient Genomic Insertions say about the Phylogeny of Species

Candidate: Schmitz, Jürgen | Reviewers: Kurtz, Joachim
Period of time: 17/04/2012 - 25/04/2013
Habilitation procedure finished at: Habilitation procedure at University of Münster

Parent organisational units

University of Münster
- Schools and Faculties
  - FB05 - Faculty of Medicine
    - Centre for Molecular Biology of Inflammation

msiFlow: automated workflows for reproducible and scalable multimodal mass spectrometry imaging and microscopy data analysis. Spangenberg P; Bessler S; Widera L; Bottek J; Richter M; Thiebes S; Siemes D; Krauß SD; Migas LG; Kasarla SS; Phapale P; Kleesiek J; Führer D; Moeller LC; Heuer H; Van de Plas R; Gunzer M; Soehnlein O; Soltwisch J; Shevchuk O; Dreisewerd K; Engel DR (2025) In: Nature Communications, 16(1), 1065-1065. doi:10.1038/s41467-024-55306-7 Research article (journal) \| Peer reviewed \| Published
Spatial biology using single-cell mass spectrometry imaging and integrated microscopy Potthoff A.; Schwenzfeier J.; Niehaus M.; Bessler S.; Hoffmann E.; Soehnlein O.; Höhndorf J.; Dreisewerd K.; Soltwisch J. (2025) In: Nature Communications, 16(1), 9129-9129. doi:10.1038/s41467-025-64603-8 Research article (journal) \| Peer reviewed \| Published
A 4-lineage Statistical Suite to Evaluate the Support of Large-Scale Retrotransposon Insertion Data to Reconstruct Evolutionary Trees Churakov, Gennady; Kuritzin, Andrej; Chukharev, Konstantin; Zhang, Fengjun; Wünnemann, Florian; Ulyantsev, Vladimir; Schmitz, Jürgen (2023) In: Systematic Biology, 72(3), 649-661. doi:10.1093/sysbio/syac082 Research article (journal) \| Peer reviewed \| Published
Homoplasy of Retrotransposon Insertions in Toothed Whales Doronina, Liliya; Ogoniak, Lynn; Schmitz, Jürgen (2023) In: Genes, 14(1830). doi:10.3390/genes14091830 Research article (journal) \| Peer reviewed \| Published
paPAML: An Improved Computational Tool to Explore Selection Pressure on Protein-Coding Sequences Steffen, R.; Ogoniak, L.; Grundmann, N.; Pawluchin, A.; Soehnlein, O.; Schmitz, J (2022) In: Genes, 2022. doi:10.3390/genes13061090 Research article (journal) \| Peer reviewed \| Published

KFO 342 - P1: Targeting nociceptors to modulate neutrophil mobilization and homing in sepsis Duration: 01/10/2023 - 30/09/2026 \| 2nd Funding period Funded by: DFG - Clinical Research Unit Type of project: Subproject in DFG-joint project hosted at University of Münster
CRC TRR 332: Neutrophils - origin, fate & function (SFB TRR 332) Duration: 01/07/2022 - 30/06/2026 \| 1st Funding period Funded by: DFG - Collaborative Research Centre Type of project: Main DFG-project hosted at University of Münster
CRC TRR 332 - Z01: Visualizing neutrophils in context Duration: 01/07/2022 - 30/06/2026 \| 1st Funding period Funded by: DFG - Collaborative Research Centre Type of project: Subproject in DFG-joint project hosted at University of Münster
CRC 1009 - A13: Neutrophils regulate endothelial dysfunction in atherosclerosis Duration: 01/06/2021 - 30/06/2024 \| 1st Funding period Funded by: DFG - Collaborative Research Centre Type of project: Subproject in DFG-joint project hosted at University of Münster
RTG 2220: Evolutionary Processes in Adaptation and Disease (RTG 2220 EvoPAD) Duration: 01/04/2017 - 30/09/2023 \| 1st Funding period Funded by: DFG - Research Training Group Type of project: Main DFG-project hosted at University of Münster

Identification of bacterial traits involved in interference with horizontal gene transfer in Escherichia coli 2025 Candidate: Yilmaz Terzioglu, Yeliz \| Supervisors: Dobrindt, Ulrilch; Kurtz, Joachim, Schmitz, Jürgen \| Reviewers: Dobrindt, Ulrilch; Kurtz, Joachim, Schmitz, Jürgen Period of time: 01/10/2020 - 09/05/2025 Doctoral examination procedure finished at: Doctoral examination procedure at University of Münster
Contribution of non-coding RNAs to the pathogenesis of cardiovascular diseases Candidate: Ghalawinji, Amer (MHD) \| Supervisors: Stoll, Monika; Bornberg-Bauer, Erich; Schmitz, Jürgen \| Reviewers: Stoll, Monika; Bornberg-Bauer, Erich; Schmitz, Jürgen Period of time: 01/04/2020 - 09/04/2024 Doctoral examination procedure finished at: Doctoral examination procedure at University of Münster
IncRNAs as a novel epigenetic layer in the genetic predisposition to heart failure Candidate: Gandhi, Shrey \| Supervisors: Stoll, Monika; Bornberg-Bauer, Erich; Schmitz, Jürgen Period of time: 16/08/2017 - 30/09/2020 Doctoral examination procedure finished at: Doctoral examination procedure at University of Münster
The genomic stability of the pathogenicity islands of uropathogenic Escherichia coli 536: the role of extrinsic and intrinsic factors Candidate: Chitto, Marco \| Supervisors: Dobrindt, Ulrich; Kurtz, Joachim; Schmitz, Jürgen Period of time: 01/02/2016 - 16/09/2020 Doctoral examination procedure finished at: Doctoral examination procedure at University of Münster
The power of ancient retroposed sequences to resolve problematic mammalian evolutionary questions Candidate: Doronina, Liliya \| Supervisors: Schmitz, Jürgen Period of time: 01/02/2013 - 27/01/2017 Doctoral examination procedure finished at: Doctoral examination procedure at University of Münster