[Assessment of available and currently applied typing methods of zoonotic pathogens using the example of Shiga toxin-producing and enterohemorrhagic Escherichia coli (STEC/EHEC)].

Richter A; Pietsch M; Harmsen D; Juraschek K; Lang C; Mellmann A; Middendorf-Bauchart B; Pulz M; Roth S; Schuh E; Fruth A; Flieger A (2023)
In: Bundesgesundheitsblatt - Gesundheitsforschung - Gesundheitsschutz, 66(1)
Type of Publication: Research article (journal)

Gut microbiome and plasma metabolome changes in rats after oral gavage of nanoparticles: sensitive indicators of possible adverse health effects.

Landsiedel R, Hahn D, Ossig R, Ritz S, Sauer L, Buesen R, Rehm S, Wohlleben W, Groeters S, Strauss V, Sperber S, Wami H, Dobrindt U, Prior K, Harmsen D, Schnekenburger J, van Ravenzwaay B (2022)
In: Particle and Fibre Toxicology, 19(1)
Type of Publication: Research article (journal)

Establishment and evaluation of a core genome multilocus sequence typing scheme for whole-genome sequence-based typing of Pseudomonas aeruginosa

Tönnies H, Prior K, Harmsen D, Mellmann A (2020)
In: J Clin Microbiol, 59(3)
Type of Publication: Research article (journal)

High interlaboratory reproducibility and accuracy of next-generation-sequencing-based bacterial genotyping in a ring trial

Mellmann A., Andersen P., Bletz S., Friedrich A., Kohl T., Lilje B., Niemann S., Prior K., Rossen J., Harmsen D. (2017)
In: Journal of Clinical Microbiology, 55(3)
Type of Publication: Research article (journal)

Ensuring backwards compatibility: Traditional genotyping efforts in the era of whole genome sequencing

Bletz S., Mellmann A., Rothgänger J., Harmsen D. (2015)
In: Clinical microbiology and infection: the official publication of the European Society of Clinical Microbiology and Infectious Diseases, 21(4)
Type of Publication: Research article (journal)

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[Assessment of available and currently applied typing methods of zoonotic pathogens using the example of Shiga toxin-producing and enterohemorrhagic Escherichia coli (STEC/EHEC)]. Richter A; Pietsch M; Harmsen D; Juraschek K; Lang C; Mellmann A; Middendorf-Bauchart B; Pulz M; Roth S; Schuh E; Fruth A; Flieger A (2023) In: Bundesgesundheitsblatt - Gesundheitsforschung - Gesundheitsschutz, 66(1) Type of Publication: Research article (journal)
Multicenter Preparedness Exercise Enables Rapid Development of Cluster-Specific PCR-Based Screening Assays from Bacterial Genomic Data Treffon J.; Prior K.; Dreesman J.; Egelkamp R.; Flieger A.; Middendorf-Bauchart B.; Projahn M.; Richter A.; Schuh E.; Harmsen D.; Mellmann A. (2023) In: Journal of Clinical Microbiology, 61(3) Type of Publication: Research article (journal)
Gut microbiome and plasma metabolome changes in rats after oral gavage of nanoparticles: sensitive indicators of possible adverse health effects. Landsiedel R, Hahn D, Ossig R, Ritz S, Sauer L, Buesen R, Rehm S, Wohlleben W, Groeters S, Strauss V, Sperber S, Wami H, Dobrindt U, Prior K, Harmsen D, Schnekenburger J, van Ravenzwaay B (2022) In: Particle and Fibre Toxicology, 19(1) Type of Publication: Research article (journal)
Development and Evaluation of a Core Genome Multilocus Sequencing Typing (cgMLST) Scheme for Serratia marcescens Molecular Surveillance and Outbreak Investigations. Kampmeier S; Prior K; Cunningham SA; Goyal A; Harmsen D; Patel R; Mellmann A (2022) In: Journal of Clinical Microbiology, 60(11) Type of Publication: Research article (journal)
Establishment and evaluation of a core genome multilocus sequence typing scheme for whole-genome sequence-based typing of Pseudomonas aeruginosa Tönnies H, Prior K, Harmsen D, Mellmann A (2020) In: J Clin Microbiol, 59(3) Type of Publication: Research article (journal)
Defining and Evaluating a Core Genome Multilocus Sequence Typing Scheme for Genome-Wide Typing of Clostridium difficile Bletz S, Janezic S, Harmsen D, Rupnik M, Mellmann A (2018) In: J. Clin. Microbiol., 56(6) Type of Publication: Research article (journal)
High interlaboratory reproducibility and accuracy of next-generation-sequencing-based bacterial genotyping in a ring trial Mellmann A., Andersen P., Bletz S., Friedrich A., Kohl T., Lilje B., Niemann S., Prior K., Rossen J., Harmsen D. (2017) In: Journal of Clinical Microbiology, 55(3) Type of Publication: Research article (journal)
State-wide surveillance of antibiotic resistance patterns and spa types of methicillin-resistant Staphylococcus aureus from blood cultures in North Rhine-Westphalia, 2011-2013 Cuny C., Layer F., Werner G., Harmsen D., Daniels-Haardt I., Jurke A., Mellmann A., Witte W., Köck R. (2015) In: Clinical microbiology and infection: the official publication of the European Society of Clinical Microbiology and Infectious Diseases, 21(8) Type of Publication: Research article (journal)
Ensuring backwards compatibility: Traditional genotyping efforts in the era of whole genome sequencing Bletz S., Mellmann A., Rothgänger J., Harmsen D. (2015) In: Clinical microbiology and infection: the official publication of the European Society of Clinical Microbiology and Infectious Diseases, 21(4) Type of Publication: Research article (journal)
Core genome multilocus sequence typing scheme for high-resolution typing of enterococcus faecium De Been M., Pinholt M., Top J., Bletz S., Mellmann A., Van Schaik W., Brouwer E., Rogers M., Kraat Y., Bonten M., Corander J., Westh H., Harmsen D., Willems R. (2015) In: Journal of Clinical Microbiology, 53(12) Type of Publication: Research article (journal)