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Institute of Experimental Pathology

Show 1 to 10 of 117 results

msiFlow: automated workflows for reproducible and scalable multimodal mass spectrometry imaging and microscopy data analysis. Spangenberg P; Bessler S; Widera L; Bottek J; Richter M; Thiebes S; Siemes D; Krauß SD; Migas LG; Kasarla SS; Phapale P; Kleesiek J; Führer D; Moeller LC; Heuer H; Van de Plas R; Gunzer M; Soehnlein O; Soltwisch J; Shevchuk O; Dreisewerd K; Engel DR (2025) In: Nature Communications, 16(1), 1065-1065. doi:10.1038/s41467-024-55306-7 Research article (journal) \| Peer reviewed \| Published
ETMR stem-like state and chemo-resistance are supported by perivascular cells at single-cell resolution de Faria, Flavia W.; Riedel, Nicole C.; Münter, Daniel; Interlandi, Marta; Göbel, Carolin; Altendorf, Lea; Richter, Mathis; Melcher, Viktoria; Thomas, Christian; Roy, Rajanya; Schoof, Melanie; Bedzhov, Ivan; Moreno, Natalia; Graf, Monika; Hotfilder, Marc; Holdhof, Dörthe; Hartmann, Wolfgang; Bruns, Ann-Katrin; Brentrup, Angela; Liesche-Starnecker, Friederike; Maerkl, Bruno; Sandmann, Sarah; Varghese, Julian; Dugas, Martin; Pinto, Pedro H.; Balbach, Sebastian T.;Lu, I-Na; Rossig, Claudia; Soehnlein, Oliver; Canak, Aysegül; Ebinger, Martin; Schuhmann, Martin; Schittenhelm, Jens; Frühwald, Michael F.; Schüller, Ulrich; Albert, Thomas K.; Walter, Carolin; Bruder, Jan M.; Kerl, Kornelius. (2025) In: Nature Communications, 16, 5394. doi:10.1038/s41467-025-60442-9 Research article (journal) \| Peer reviewed \| Published
Spatial biology using single-cell mass spectrometry imaging and integrated microscopy Potthoff A.; Schwenzfeier J.; Niehaus M.; Bessler S.; Hoffmann E.; Soehnlein O.; Höhndorf J.; Dreisewerd K.; Soltwisch J. (2025) In: Nature Communications, 16(1), 9129-9129. doi:10.1038/s41467-025-64603-8 Research article (journal) \| Peer reviewed \| Published
A 4-lineage Statistical Suite to Evaluate the Support of Large-Scale Retrotransposon Insertion Data to Reconstruct Evolutionary Trees Churakov, Gennady; Kuritzin, Andrej; Chukharev, Konstantin; Zhang, Fengjun; Wünnemann, Florian; Ulyantsev, Vladimir; Schmitz, Jürgen (2023) In: Systematic Biology, 72(3), 649-661. doi:10.1093/sysbio/syac082 Research article (journal) \| Peer reviewed \| Published
Homoplasy of Retrotransposon Insertions in Toothed Whales Doronina, Liliya; Ogoniak, Lynn; Schmitz, Jürgen (2023) In: Genes, 14(1830). doi:10.3390/genes14091830 Research article (journal) \| Peer reviewed \| Published
paPAML: An Improved Computational Tool to Explore Selection Pressure on Protein-Coding Sequences In: . \| Peer reviewed
Reunion of Australasian Possums by Shared SINE Insertions In: , -. \| Peer reviewed
ExoPLOT: Representation of alternative splicing in human tissues and developmental stages with transposed element (TE) involvement In: , . \| Peer reviewed
Contradictory Phylogenetic Signals in the Laurasiatheria Anomaly Zone In: . \| Peer reviewed
Euarchontoglires Challenged by Incomplete Lineage Sorting In: . \| Peer reviewed

Steffen, R.; Ogoniak, L.; Grundmann, N.; Pawluchin, A.; Soehnlein, O.; Schmitz, J

(2022)

Genes

, 2022

doi:10.3390/genes13061090

Research article (journal)

| Published

Doronina, Liliya; Feigin, Charles Y.; Schmitz, Jürgen

(2022)

Systematic Biology

, 71

(5)

1045

1053

doi:10.1093/sysbio/syac025

Research article (journal)

| Published

Zhang, Fengjun; Raabe, Carsten Alexander; Cardoso-Moreiera, Margarida; Brosius, Jürgen; Kaessmann, Henrik; Schmitz, Jürgen

(2022)

Genomics

, 114

110434

Research article (journal)

| Published

Doronina, Liliya Hughes, Graham M. Moreno‐Santillan, Diana Lawless, Colleen Lonergan, Tadhg Ryan, Louise Jebb, David Kirilenko, Bogdan M. Korstian, Jennifer M. Dávalos, Liliana M. Vernes, Sonja C. Myers, Eugene W. Teeling, Emma C. Hiller, Michael Jermiin, Lars S. Schmitz, Jürgen Springer, Mark S. Ray, David A.

(2022)

Genes

, 13

(766)

doi:10.3390/genes13050766

Research article (journal)

| Published

Doronina, Liliya Reising, Olga Clawson, Hiram Churakov, Gennady Schmitz, Jürgen

(2022)

Genes

, 13

(774)

doi:10.3390/genes13050774

Research article (journal)

| Published

msiFlow: automated workflows for reproducible and scalable multimodal mass spectrometry imaging and microscopy data analysis. Spangenberg P; Bessler S; Widera L; Bottek J; Richter M; Thiebes S; Siemes D; Krauß SD; Migas LG; Kasarla SS; Phapale P; Kleesiek J; Führer D; Moeller LC; Heuer H; Van de Plas R; Gunzer M; Soehnlein O; Soltwisch J; Shevchuk O; Dreisewerd K; Engel DR (2025) In: Nature Communications, 16(1), 1065-1065. doi:10.1038/s41467-024-55306-7 Research article (journal) \| Peer reviewed \| Published
ETMR stem-like state and chemo-resistance are supported by perivascular cells at single-cell resolution de Faria, Flavia W.; Riedel, Nicole C.; Münter, Daniel; Interlandi, Marta; Göbel, Carolin; Altendorf, Lea; Richter, Mathis; Melcher, Viktoria; Thomas, Christian; Roy, Rajanya; Schoof, Melanie; Bedzhov, Ivan; Moreno, Natalia; Graf, Monika; Hotfilder, Marc; Holdhof, Dörthe; Hartmann, Wolfgang; Bruns, Ann-Katrin; Brentrup, Angela; Liesche-Starnecker, Friederike; Maerkl, Bruno; Sandmann, Sarah; Varghese, Julian; Dugas, Martin; Pinto, Pedro H.; Balbach, Sebastian T.;Lu, I-Na; Rossig, Claudia; Soehnlein, Oliver; Canak, Aysegül; Ebinger, Martin; Schuhmann, Martin; Schittenhelm, Jens; Frühwald, Michael F.; Schüller, Ulrich; Albert, Thomas K.; Walter, Carolin; Bruder, Jan M.; Kerl, Kornelius. (2025) In: Nature Communications, 16, 5394. doi:10.1038/s41467-025-60442-9 Research article (journal) \| Peer reviewed \| Published
Spatial biology using single-cell mass spectrometry imaging and integrated microscopy Potthoff A.; Schwenzfeier J.; Niehaus M.; Bessler S.; Hoffmann E.; Soehnlein O.; Höhndorf J.; Dreisewerd K.; Soltwisch J. (2025) In: Nature Communications, 16(1), 9129-9129. doi:10.1038/s41467-025-64603-8 Research article (journal) \| Peer reviewed \| Published
A 4-lineage Statistical Suite to Evaluate the Support of Large-Scale Retrotransposon Insertion Data to Reconstruct Evolutionary Trees Churakov, Gennady; Kuritzin, Andrej; Chukharev, Konstantin; Zhang, Fengjun; Wünnemann, Florian; Ulyantsev, Vladimir; Schmitz, Jürgen (2023) In: Systematic Biology, 72(3), 649-661. doi:10.1093/sysbio/syac082 Research article (journal) \| Peer reviewed \| Published
Homoplasy of Retrotransposon Insertions in Toothed Whales Doronina, Liliya; Ogoniak, Lynn; Schmitz, Jürgen (2023) In: Genes, 14(1830). doi:10.3390/genes14091830 Research article (journal) \| Peer reviewed \| Published
paPAML: An Improved Computational Tool to Explore Selection Pressure on Protein-Coding Sequences In: . \| Peer reviewed
Reunion of Australasian Possums by Shared SINE Insertions In: , -. \| Peer reviewed
ExoPLOT: Representation of alternative splicing in human tissues and developmental stages with transposed element (TE) involvement In: , . \| Peer reviewed
Contradictory Phylogenetic Signals in the Laurasiatheria Anomaly Zone In: . \| Peer reviewed
Euarchontoglires Challenged by Incomplete Lineage Sorting In: . \| Peer reviewed